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Table 2 Comparison of the genotypic and allelic frequencies of GALNT2 rs2144300 and rs4846914 between the Mulao and Han populations

From: Association of the GALNT2 gene polymorphisms and several environmental factors with serum lipid levels in the Mulao and Han populations

SNP

Group

n

Genotype [n (%)]

Allele [n (%)]

AA

AB

BB

A

B

GALNT2 rs2144300

Mulao

775

491(63.35)

244(31.48)

40(5.16)

1226(79.10)

324(20.90)

 

Han

699

447(63.95)

232(33.19)

20(2.86)

1126(80.54)

272(19.46)

 

χ2

-

5.075

0.954

 

P

-

0.079

0.329

 

Mulao/male

310

208(67.10)

85(27.42)

17(5.48)

501(80.81)

119(19.19)

 

Mulao/female

465

283(60.86)

159(34.19)

23(4.95)

725(77.96)

205(22.04)

 

χ2

-

3.957

1.827

 

P

-

0.138

0.177

 

Han/male

266

158(59.40)

100(37.59)

8(3.01)

416(78.20)

116(21.80)

 

Han/female

433

289(66.75)

132(30.48)

12(2.77)

710(81.99)

156(18.01)

 

χ2

-

3.931

3.022

 

P

-

0.140

0.082

GALNT2 rs4846914

Mulao

680

418(61.47)

230(33.82)

32(4.71)

1066(78.38)

294(21.62)

 

Han

649

365(56.24)

250(38.52)

34(5.24)

980(75.50)

318(24.50)

 

χ2

-

3.760

3.112

 

P

-

0.153

0.078

 

Mulao/male

249

151(60.64)

88(35.34)

10(4.02)

390(78.31)

108(21.69)

 

Mulao/female

431

267(61.95)

142(32.95)

22(5.10)

676(78.42)

186(21.58)

 

χ2

-

0.709

0.002

 

P

-

0.702

0.962

 

Han/male

260

159(61.15)

87(33.46)

14(5.39)

405(77.88)

115(22.12)

 

Han/female

389

206(53.96)

163(41.90)

20(5.14)

575(73.91)

203(26.09)

 

χ2

-

4.762

2.665

 

P

-

0.092

0.103

  1. Allele A, rs2144300 C and rs4846914 G; Allele B, rs2144300 T and rs4846914 A; Genotype AA, rs2144300 CC and rs4846914 GG; Genotype AB, rs2144300 CT and rs4846914 GA; Genotype BB, rs2144300 TT and rs4846914 AA