Skip to main content

Table 6 Effects of LPS, LPS + dexamethasone, and dexamethasone on levels of gene expression, and biological functions in macrophages of 8-week-old C57BL/6 male mice1.

From: Inhibition of nitric oxide in LPS-stimulated macrophages of young and senescent mice by δ-tocotrienol and quercetin

   

Regulation

Regulation

 

Regulation

 

#

Functions

LPS

Up

Down

LPS + Dexa

Up

Down

Dexa

Up

Down

1

Immune response

182

130

52

126

77

49

97

53

44

2

Cell to cell signaling

124

86

38

119

64

55

70

24

46

3

Cellular growth & proliferation

74

54

20

84

38

46

18

2

16

4

Inflammatory diseases

74

53

21

83

58

25

17

11

6

5

Respiratory diseases

44

36

8

28

24

4

17

11

6

6

Immunological diseases

39

33

6

16

12

4

   

7

Cancer

34

25

9

45

34

11

   

8

Hepatic diseases

26

23

3

35

31

4

   

9

Cardiovascular system

18

14

4

20

13

7

14

10

4

10

Carbohydrate Metabolism

8

5

3

      

11

Lipid metabolism

7

7

 

55

36

19

27

25

2

12

Neurological Diseases

6

5

1

26

23

3

   

13

Free-radical scavenging

5

4

1

   

5

2

3

14

Gene expression

4

4

 

25

21

4

18

16

2

Total

 

645

479

166

662

431

231

283

154

129

  1. LPS = lipopolysaccharide; Dexa = Dexamethasone.
  2. 1The data in this Table represents the expression of a number of genes modulated by various treatments; The macrophages were treated with LPS alone (10 ng/well), LPS (10 ng/well) + dexamethasone (10 μM), or dexamethasone (10 μM) alone as described in the experimental section. Total RNA was extracted from the treated cells and their gene expression profiles compared with the control (LPS), and untreated cells. The values here been corrected for differences in the arrays. The gene expression values are reported as average normalization log ratios. A data containing gene identifiers and their corresponding expression values were uploaded as an Excel spreadsheet using the template provided in the Ingenuity Pathways Analysis program. Similar conditions were used for data provided in Tables 8, 9, and 10.