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Table 2 Single nucleotide polymorphisms (SNPs) in the Stearoyl-CoA desaturase (Scd-1) gene in four ethnic populations

From: Genetic variation in lipid desaturases and its impact on the development of human disease

CEU

CHB

JPT

YRI

rs2060792

rs2060792

rs2060792

 
 

rs7088953

 

rs7088953

rs17669878

rs17669878

rs17669878

rs17669878

rs11190478

rs11190478

rs11190478

rs11190478

rs735877

rs735877

rs735877

rs735877

rs11599710

rs11599710

rs11599710

rs11599710

rs670213

rs670213

rs670213

rs670213

 

rs640773

rs640773

rs640773

 

rs639060

rs639060

rs639060

rs1502593

rs1502593

rs1502593

rs1502593

 

rs612472

rs612472

rs612472

 

rs529271

rs529271

rs529271

rs522951

rs522951

rs522951

rs522951

 

rs681278

rs681278

rs681278

rs11190480

rs11190480

rs11190480

rs11190480

rs11190483

rs11190483

rs11190483

 
   

rs7904902

rs3870747

rs3870747

rs3870747

rs3870747

rs3071

rs3071

rs3071

 

rs3829160

rs3829160

rs3829160

 

rs3793766

rs3793766

rs3793766

rs3793766

   

rs12247426

rs3793767

rs3793767

rs3793767

rs3793767

rs3793768

rs3793768

rs3793768

rs3793768

rs2234970

rs2234970

rs2234970

rs2234970

 

rs599961

rs599961

rs599961

rs10883463

   

rs3978768

rs3978768

rs3978768

 

rs11557927

rs11557927

rs11557927

rs11557927

rs10883465

rs10883465

rs10883465

rs10883465

rs7849

rs7849

rs7849

rs7849

 

rs560792

rs560792

rs560792

rs508384

rs508384

rs508384

rs508384

 

rs539480

rs539480

 

rs1393491

rs1393491

rs1393491

rs1393491

rs1393492

rs1393492

rs1393492

rs1393492

rs575338

   

rs490726

rs490726

rs490726

 

rs11190488

   

rs569184

   

rs569910

rs569910

rs569910

rs569910

 

rs570844

rs570844

rs570844

 

rs608622

rs608622

rs608622

   

rs17113027

  1. This table highlights the ethnic differences in Scd-1 gene variation, using data from the International HapMap Project database (HapMap Data Rel/24phaseII Nov08, on NCBI B36 assembly, dbSNP b126). Data from the 4 populations was extracted: 1) CEU: CEPH- Utah residents with European ancestry, 2) CHB: Han Chinese in Beijing, China, 3) JPT: Japanese in Tokyo, Japan, and 4) YRI: Yoruba in Ibadan, Nigeria. Tag SNPs (tSNPs; in bold font) were consistently selected with Haploview software V4.1 using a minor allele frequency (MAF) > 5% and r2≥0.8.