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Table 1 Top Canonical pathways identified in adipose tissue of rats undergoing two cycles of chemotherapy

From: Chemotherapy diminishes lipid storage capacity of adipose tissue in a preclinical model of colon cancer

Pathway

P-value

Ratio

Molecules

Mitochondrial Dysfunction

5.01E-14

0.1

SDHB, NDUFA9, ATP5O, MT-CO2, PDHA1, PRDX3, PARK7, NDUFV2, UQCRC2,CAT, COX5A, UQCRFS1, VDAC1,UQCRC1, MAOA, GPX3, GSTMS

Gluconeogenesis

7.94E-13

0.3

ENO1, ENO3, PGAM1, ALDOA, GAPDH, ME1,

MDH2, ALDOC

Glycolysis

4.90E-09

0.2

ENO1, ENO3, PGAM1, ALDOA, GAPDH, ALDOC

Oxidative Phosphorylation

1.26E-08

0.1

SDHB, NDUFA9, NDUFV2, UQCRC2, ATP5O, COX5A, UQCRFS1, MT-CO2, UQCRC1

Krebs Cycle

1.74E-07

0.2

SDHB, CS, IDH3A, IDH2, FH, MDH2

Acetyl-CoA Biosynthesis (Pyruvate Dehydrogenase Complex)

6.31E-06

0.4

PDHA1, DLAT, PDHB

TR/RXR Activation

2.09E-05

0.1

ENO1, FAS, ACACA, PCK1, ME1, THRSP

Pentose Phosphate Pathway

2.09E-05

0.3

PGD, TKT, PGLS

Fatty Acid

β-oxidation

3.24E-05

0.1

ECHS1, ACAA1, SCP2, IVD, CPT2, ACADVL

  1. The ratio is calculated based on the numbers of proteins in a given pathway divided by total numbers of proteins that make up that pathway in IPA. P-value calculated by Fisher’s exact test. Abbreviations: TR Thyroid hormone receptor, RXR Retinoid X receptor, LXR Liver X receptor