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Table 4 Haplotype block analysis of metabolic and anthropometric changes after vitamin D supplementation (4000 IU/day) for 12 weeks

From: Vitamin D receptor gene polymorphisms affecting changes in visceral fat, waist circumference and lipid profile in breast cancer survivors supplemented with vitamin D3

Variables

H1

H2

H3

H4

Global-Stat

P Value*

FDR P Value**

Global-Stat

P Value*

FDR P Value**

Global-Stat

P Value*

FDR P Value**

Global-Stat

P Value*

FDR P Value**

BMI, Kg/m2

18.87

0.27

0.65

3.89

0.79

0.92

9.94

0.19

0.65

5.61

0.46

0.72

WC, cm

10.66

0.82

0.92

5.47

0.60

0.86

8.05

0.32

0.65

6.73

0.34

0.65

HC, cm

26.97

0.04

0.25

4.68

0.69

0.92

7.33

0.39

0.66

2.88

0.82

0.92

Fat mass, cm

17.33

0.63

0.86

7.66

0.36

0.65

3.96

0.78

0.92

8.26

0.21

0.65

Muscle mass, (%)

13.50

0.85

0.92

4.28

0.74

0.92

7.60

0.36

0.65

11.36

0.07

0.34

Trunk fat, (%)

17.50

0.62

0.86

9.01

0.25

0.65

2.64

0.91

0.93

7.13

0.30

0.65

Visceral fat

45.46

< 0.001

< 0.001

3.58

0.82

0.92

79.69

< 0.001

< 0.001

7.82

0.25

0.65

LDL, mg/dL

18.90

0.27

0.65

7.53

0.37

0.65

9.37

0.22

0.65

9.20

0.16

0.64

HDL, mg/dL

27.83

0.03

0.22

16.43

0.02

0.22

5.74

0.56

0.84

9.24

0.16

0.64

TC, mg/dL

15.83

0.46

0.72

15.02

0.03

0.22

2.90

0.89

0.93

6.41

0.37

0.65

TG, mg/dL

−53.73

1

1.00

3.24

0.86

0.92

13.06

0.07

0.34

13.48

0.03

0.22

  1. BMI Body mass index, WC Waist circumference, HC Hip circumference, TC Total cholesterol, LDL-C Low-density lipoprotein cholesterol, HDL-C High-density lipoprotein cholesterol, TG Triglycerides
  2. H1, Cdx2, FokI, BsmI, ApaI, TaqI; H2, Cdx2, FokI, BsmI, H3, BsmI, ApaI, TaqI; H4, FokI, BsmI, ApaI
  3. *All values were adjusted for age, baseline 25-hydroxy vitamin D (25(OH)D), energy intake, fat intake and physical activity
  4. **FDR P values were obtained using the false-discovery rate (FDR) methods