Variant | Zygosity | The other variant in case of compound heterozygosity (functional effect)b | Plasma LPL activity (% of normal) | Disease referred for genetic analysis | Patient’s age at genetic analysis | Patient’s disease history | ||
---|---|---|---|---|---|---|---|---|
HGVS nomenclature (NM_000237.3) | Original descriptiona | Reference | ||||||
c.10_11insTTCG p.(Ala117Serfs*61) | [23] | Heterozygote | NIc | Severe HTG | NI | NI | ||
c.32dup p.(Ala12Glyfs*29) | This study | Heterozygote | No data | HTG-AP in pregnancy | #1: 33 y (31+4 weeks of gestation) #2: 28y (38+4 weeks of gestation) | #1: Gestational diabetes mellitus at 28 weeks of gestation #2: negative | ||
c.46_47del p.(Gln16Glufs*24) | Q-12E > 11Xd | [24] | Heterozygote | NI | Severe HTG | NI | NI | |
c.77_88 + 1del p.(Ala26Lysfs*13) | This study | Heterozygote | No data | HTG-AP | 43 y | Three years of HTG | ||
c.94_98del p.(Arg32Phefs*7) | [25] | Heterozygote | NI | HTG | NI | NI | ||
c.128dup p.(Arg44Lysfs*4) | [26] | Compound heterozygote | p.Asn318Ser (experimentally determined to have 60% wild-type LPL activity by another study [27]) | NI | Eruptive cutaneous xanthomata and elevated plasma TG concentration | 29 y | Negative | |
c.133_143del p.(Thr45Hisfs*3) | 11 bp deletion in exon 2 | [28] | Compound heterozygote | p.Gly215Glue (experimentally determined to have a near complete functional loss of LPL by two studies [29, 30]) | < 1% | Familial chylomicronemia | 10 y | Marked HTG at birth |
c.133dup p.(Thr45Asnfs*3) | c.134insA | [31] | Heterozygote | NI | Moderate HTG | 41 y | NI | |
c.183dup p.(Glu62Argfs*28) | Insertion of an "A" at nucleotide 183 (codon Glu35) | [32] | Homozygote | 0 | Familial chylomicronemia | 5.5 y | Chylomicronemia at 1 month of age after an episode of AP | |
c.247_249 + 1del | 4-bp ACGG deletion at the 3' boundary of exon 2 | [33] | Unknownf | Unknown | LPL deficiency | Unknown | Unknown | |
c.287_288del p.(Val96Glyfs*51) | Deletion of nucleotides G286 and T287 in exon 3 | [34] | Compound heterozygote | c.440_443delg p.(Asn147Thrfs*24) | 0 | Chylomicronemia | 17 y | Manifested with failure to thrive and abdominal pain at age 3 weeks |
c.289_294delinsTTTGCCAAAA p.(Ala97Phefs*52) | Wrongly described as c.289_299delGCCGCCinsTTTGCCAAAA | [35] | Homozygote | NI | Very severe HTG and cerebral dysmorphism | 2 m | NI | |
c.290_293delinsGG p.(Ala97Glyfs*50) | Deletion of four nucleotides (∆CCGC) and an insertion of two nucleotides (∇GG) at position 290 in exon 3 | [36] | Compound heterozygote | p.Leu313Proh (experimentally shown to have < 1% of wild-type LPL activity [36]) | 6.6% | Familial Chylomicronemia | 67 y | Eruptive xanthomata and chylomicronemia were noted at the age of 53, during an episode of acute pancreatitis |
c.312del p.(Asp105Thrfs*67) | [37] | Homozygote | 0 | FCS | 3 y | NI | ||
c.334dup p.(Asp112Glyfs*36) | [38] | Compound heterozygote | p.Arg102Thr (both p.Arg102Thr and p.(Asp112Glyfs*36) were experimentally shown to cause a complete functional loss of LPL [38]) | NI | Unexplained fever (“Milky serum” was noticed during laboratory examination) | 1 m | ||
c.338_339insAGAGTACCATTCGATAC p.(Trp113*) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.348_349insAGTACCATTCGACAGTC p.(Ala117Serfs*61) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.373dup p.(Ala125Glyfs*23) | c.373_374insG | [39] | Compound heterozygote | p.His273Arg (experimentally determined to have 2% of wild-type LPL activity [39]) | NI | Severe HTG | 3 y | NI |
c.377_378insAGAGTACCATT p.(Tyr127Glufs*49) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.384delinsTGGGCT p.(Lys129Glyfs*45) | A six base-pair insertion at the site of a single base deletion, and that the net insertion of five base-pairs at amino acid positions 102 to 103 causes a shift in the reading frame | [40] | Unknown | Unknown | LPL deficiency | Unknown | Unknown | |
c.386_390del p.(Lys129Serfs*17) | [31] | Heterozygote | NI | Severe HTG | 46 y | NI | ||
c.431_432AG[3] p.(Glu145Argfs*4) | c.429_430insGAGA | [23] | Heterozygote | NI | Severe HTG | NI | NI | |
c.438del p.(Phe146Leufs*26) | [41] | NI | NI | HTG | NI | NI | ||
c.440_443del p.(Asn147Thrfs*24) | A 4 bp deletion (ACTA) in exon 4 | [34] | Compound heterozygote | c.287_288del (described earlier in the Table) | 0 | Chylomicronemia | 17 y | Manifested with failure to thrive and abdominal pain at age 3 weeks |
c.483delA p.(Ala162Profs∗10) | [42] | Heterozygote | NI | Glycogen storage disease type-Ib (severe HTG discovered during laboratory tests) | 5 m | Hypoglycemia, hyperlactic acidosis, and sepsis in the neonatal period | ||
c.501_502insGAGAGTACCATTCGAGA p.(Ala168Glufs*10) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.596del p.(Ser199Phefs*8) | Deletion of the second nucleotide of codon 172; p.S172fsX179 | [43] | Heterozygote | 30% | Recurrent hypertriglyceridemic pancreatitis | 50 y | Found to be hypertriglyceridemic for 30 years and suffered from four episodes of acute pancreatitis between the ages of 46 y and 49 y | |
c.599del p.(Pro200Leufs*7) | [44] | Heterozygote | NI | HTG | NI | NI | ||
c.624del p.(Leu209Tyrfs*43) | [45] | Heterozygote | NI | NI | NI | NI | ||
c.651del p.(Gly218Valfs*34) | [35] | Homozygote | NI | Severe HTG | 4 y | Pancreatitis at the age 2 y | ||
c.708del p.(Gly237Valfs*15) | Deletion of the third nucleotide of the codon for Gly209, resulting in termination after 223 residues | [46] | NI | NI | Severe HTG | NI | NI | |
c.742del p.(Ala248Leufs*4) | Deletion of a C at base 916 | [47] | Homozygote | 0 (in both diseased siblings) | Type I hyperlipoproteinemia | NI | Both patients had recurrent episodes of abdominal pain and pancreatitis (age of first disease onset not described) | |
c.765_766del p.(Gly256Thrfs*26) | c.765_766delAG | [48] | Homozygote | 0 (in two patients from a same family) | Type I hyperlipoproteinemia | #1: 19 y #2: 32 y | #1: NI #2: NI | |
c.767_768insTAAATATT p.(Gly256_Gly258del) | [20] | Homozygote | NI | HTG-AP | 25 y | Central abdominal pain on two occasions in the previous two years; without any other syndromes or diseases | ||
c.769_770insCA p.(Leu257Profs*8) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.835_836del p.(Leu279Valfs*3) | [35] | Homozygote | NI | Severe HTG (two patients from a same family) | #1: 37 y #2: 29 y | #1: NI #2: Recurrent pancreatitis starting from the age 1 y | ||
c.840del p.(Asn281Metfs*23) | [35] | Compound heterozygote | Gross deletion of the LPL gene | Familial chylomicronemia | 1 m | Had severe HTG, hepatomegaly, lipemia retinalis and eruptive xanthomas | ||
c.899_921dup p.(Asn308Glyfs*4) | [49] | Homozygote | NI | Severe HTG | NI | HTG since childhood | ||
c.901del p.(Leu301Serfs*3) | [49] | Heterozygote | 23% | Severe HTG | 39 y | NI | ||
c.953del p.(Asn318Ilefs*13) | One nucleotide deletion of A coding Asn 291 | [50] | Compound heterozygote | p.Ile221Thri (almost complete loss of LPL activity [51, 52]) | 7.5% | Severe HTG | 33 y | Suffered from AP several times after drinking alcohol. He did not have diabetes, renal disease, liver disease or hormonal disease. No corneal opacification, xanthomatosis or hepatosplenomegaly were noted |
c.1008del p.(Met336Ilefs*10) | [45] | Heterozygote | NI | NI | NI | NI | ||
c.1010_1011insATTCGAGAGC p.(Tyr338Phefs*19) | c.1009_1010insCATTCGAGAG | [23] | Heterozygote | NI | Severe HTG | NI | NI | |
c.1016_1017insC p.(Lys339Asnfs*15) | AAA → AACA in exon 6 | [53] | Heterozygote | NI | HTG (reported in a family; all six variant carriers had HTG while all noncarriers had normal TG levels) | NI | NI | |
c.1044_1050del p.(His348Glnfs*43) | [49] | Heterozygote | NI | Severe HTG | 52 y | NI | ||
c.1081_1082insAGTA p.(Ala361Glufs*4) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.1107_1108insATTCGAAGAGCGC p.(Val370Ilefs*9) | c.1106_1107insCATTCGAAGAGCG | [23] | Heterozygote | NI | Severe HTG | NI | NI | |
c.1115dup p.(Ser373Glufs*2) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.1119_1120insACCATTC p.(Glu374Thrfs*11) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.1121_1122insAGAGCGC p.(Asn375Glufs*10) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.1138_1139del p.(Leu380Alafs*2) | Deletion CT1312–1313 that covers the last two bases of exon 7 | [54] | Homozygote | 0 (in both the proband and his sister) | Severe HTG | Proband: 17.1 y Sister: 8.9 y | Proband: recurrent episodes of abdominal pain and unexplained diarrhea; acute pancreatitis at age 5 years Sister: severe HTG | |
c.1160_1161insT p.(Lys387Asnfs*26) | [55] | Homozygote | NI | LPL deficiency | NI | NI | ||
c.1163_1164insA p.(Tyr389Leufs*24) | ACC → ACAC in exon 8 | [53] | Heterozygote | NI | HTG (variant carriers had significantly higher TG levels than noncarriers based upon clinical data from 15 variant carriers and 17 noncarriers | NI | NI | |
c.1303_1304del p.(Ala435Argfs*12) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.1306_1307insAGTACCATTC p.(Gly436Glufs*15) | [23] | Heterozygote | NI | Severe HTG | NI | NI | ||
c.1373del p.(Ala458Aspfs*6) | [56] | Homozygote | NI | LPL deficiency | 2 m | Patient exhibited lipemic plasma, lipemia retinalis, hepatomegaly, splenomegaly, and failure to thrive |